User Guide
==========

This section contains guides and documents about **EnzyMM** usage. If you would like more
information or if some things are unclear, feel free to drop me a line on GitHub.

.. toctree::
   :maxdepth: 1
   :caption: Getting Started

    Installation <install>
    Command Line Interface <cli>
    Using the API <api-usage>

.. toctree::
   :maxdepth: 1
   :caption: Resources

   Understanding Templates <templates>
   EnzyMM Output <output>
   Analysing Results <analysis>
   Contribution Guide <contributing>
   Changelog <changes>
   Copyright Notice <copyright>